Blog Archives
Presenting Lightserv: the Histology Core Facility Web Portal
The Brain Registration and Histology Core Facility at Princeton Neuroscience Institute is officially launching version 1 of their web portal, called Lightserv, today. The portal can be accessed at: https://braincogs00.pni.princeton.edu/. You must be on campus or using a VPN to … Continue reading
New Neuroglancer feature: Stereotactic coordinates (Paxinos Mouse Brain Atlas)
In this post, we introduce a new feature to Neuroglancer which is useful when browsing your data after it has been aligned to the Allen Mouse Brain Atlas: stereotactic coordinates. This feature is only available if using the BRAIN CoGS … Continue reading
Using a custom annotation atlas in Neuroglancer
The Brody Lab at the Princeton Neuroscience Institute is in the process of developing a detailed rat brain atlas for interpreting their data from whole brain microscopy, analogous to the Allen Mouse Brain Atlas. The goal is to start with … Continue reading
Getting started with Neuroglancer
Neuroglancer is a powerful web-based viewer for volumetric data. It is especially useful for viewing large three dimensional datasets that can be impractical to view in other traditional image viewer applications, such as FIJI. It is the main tool we … Continue reading